課程資訊
課程名稱
生物資訊相關軟體工程
SOFTWARE ENGINEERING FOR BIOINFORMATICS 
開課學期
97-1 
授課對象
電機資訊學院  資訊工程學研究所  
授課教師
高成炎 
課號
CSIE5008 
課程識別碼
922 U0080 
班次
 
學分
全/半年
半年 
必/選修
選修 
上課時間
星期二A,B,C(18:25~21:05) 
上課地點
資105 
備註
限學士班三年級以上
總人數上限:30人 
 
課程簡介影片
 
核心能力關聯
本課程尚未建立核心能力關連
課程大綱
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課程概述

The course consists of two parts:
- Software engineering
- Practical applications for bioinformatics
In Software engineering part, we will introduce main disciplines within software engineering, including:
(1) Life cycle planning models
(2) Requirement specification process
(3) Design, implementation, and test
(4) Quality assurance
(5) Project management
(6) Object oriented analysis and design
(7) Component based engineering (Software IC)
(8) Rapid prototyping
(9) Functional & Rule-Based Programming Language
(10) CASE (Computer-Aided Software Engineer), etc.
In Bioinformatics part, we will introduce some applications in biology, including:
(1) Gene prediction
(2) Gene chip (microarray) analysis
(3) Sequence alignment
(4) Protein structure prediction and folding
(5) Docking and drug design
 

課程目標
The course consists of two parts:
- Software engineering
- Practical applications for bioinformatics
In Software engineering part, we will introduce main disciplines within software engineering, including:
(1) Life cycle planning models
(2) Requirement specification process
(3) Design, implementation, and test
(4) Quality assurance
(5) Project management
(6) Object oriented analysis and design
(7) Component based engineering (Software IC)
(8) Rapid prototyping
(9) Functional & Rule-Based Programming Language
(10) CASE (Computer-Aided Software Engineer), etc.
In Bioinformatics part, we will introduce some applications in biology, including:
(1) Gene prediction
(2) Gene chip (microarray) analysis
(3) Sequence alignment
(4) Protein structure prediction and folding
(5) Docking and drug design
 
課程要求
Requirement:
A Bioinformatics applications term project and consists of:
(1) Requirement specification
(2) Design
(3) Implementation
(4) Verification
(5) Presentation of the result
 
預期每週課後學習時數
 
Office Hours
 
指定閱讀
 
參考書目
References:
1. Software Engineering: A Practitioner's Approach, Roger Pressman, 5th Edition, McGraw-Hill, 2001
2. Software Engineering, Ian, Addison-Wesley, ISBN 0-201-17568-1
3. Bioinformatics Basics: Applications in Biological Science and Medicine
4. Developing Bioinformatics Computer Skills, O'REILLY, 2001.
5. 生物資訊學-電腦技術, O'REILLY, 2002
 
評量方式
(僅供參考)
 
No.
項目
百分比
說明
1. 
期中考 
20% 
 
2. 
期末考 
20% 
 
3. 
作業 
20% 
 
4. 
報告 
20% 
 
5. 
出席 
20% 
 
 
課程進度
週次
日期
單元主題